On Tuesday, migrants at the airport in Port-au-Prince rushed back towards the plane they had arrived on, while others threw shoes at the jet.
Last weekend, the US started flying out migrants from a Texas border town which has seen an influx in recent weeks.
About 13,000 would-be immigrants have gathered under a bridge connecting Del Rio in Texas to Ciudad Acuña in Mexico.
Separately reports have emerged of thousands - mostly Haitians - stranded near the border between Colombia and Panama.
Chaos unfolded at Haiti's Toussaint Louverture airport as one man attempted to re-board the aircraft. The plane's crew rushed to close the jet's doors in time, Reuters news agency reports.
Video footage taken at the airport shows people scrambling for their personal belongings after their bags were dumped out of the plane.
There are reports that some migrants were not told they would be returning to Haiti.